Modules#
- glhmm.glhmm
- glhmm.io
- glhmm.preproc
- glhmm.auxiliary
- glhmm.utils
- glhmm.graphics
blue_colormap()
create_cmap_alpha()
custom_colormap()
interpolate_colormap()
plot_average_probability()
plot_condition_difference()
plot_correlation_matrix()
plot_p_value_matrix()
plot_p_values_bar()
plot_p_values_over_time()
plot_permutation_distribution()
plot_scatter_with_labels()
plot_vpath()
red_colormap()
show_Gamma()
show_beta()
show_temporal_statistic()
show_trans_prob_mat()
- glhmm.prediction
- glhmm.statistics
calculate_baseline_difference()
calculate_geometric_pval()
calculate_nan_correlation_matrix()
calculate_nan_f_test()
calculate_nan_regression()
calculate_nan_regression_f_test()
calculate_nan_t_test()
calculate_statepair_difference()
deconfound_values()
detect_significant_intervals()
generate_vpath_1D()
get_concatenate_sessions()
get_indices_array()
get_indices_from_list()
get_input_shape()
get_pval()
get_session_indices()
get_timestamp_indices()
identify_coloumns_for_t_and_f_tests()
initialize_arrays()
initialize_permutation_matrices()
permutation_matrix_across_subjects()
permutation_matrix_across_trials_within_session()
permutation_matrix_within_subject_across_sessions()
permute_subject_trial_idx()
process_family_structure()
pval_cluster_based_correction()
pval_correction()
reconstruct_concatenated_design()
remove_nan_values()
surrogate_state_time()
surrogate_viterbi_path()
test_across_sessions_within_subject()
test_across_subjects()
test_across_trials_within_session()
test_across_visits()
test_statistics_calculations()
validate_condition()
viterbi_path_to_stc()
- glhmm.palm_functions